optimizeMesh.cpp File Reference

#include <math.h>
#include <iostream>
#include <string>
#include <PhysicalModel.h>
#include <MultiComponent.h>
#include <StructuralComponent.h>
#include <Atom.h>

Include dependency graph for optimizeMesh.cpp:

Classes
class	Cluster
	class Cluster More...

Functions
Cluster *	insert (Atom *a)
int	main (int argc, char **argv)
void	optimize (string clusterFile)
void	saveClusters (string clusterFile)
void	update (MultiComponent *mc)

Variables
vector< Cluster * >	allClusters
unsigned int	nrOfNewAtoms
PhysicalModel *	pm
	global variables More...
double	precision
map< Atom *, Atom * >	replacement

Function Documentation

Cluster* insert

(

Atom *

a

)

References Cluster::addAtom(), c, it, and precision.

Referenced by optimize(), and ProgramArg::ProgramArg().

int main	(	int	argc,
		char **	argv
	)

References filename, PhysicalModel::getName(), PhysicalModel::getNumberOfAtoms(), nrOfNewAtoms, optimize(), outputFile, pm, precision, PhysicalModel::setName(), PhysicalModel::VERSION, PMLAbortException::what(), and PhysicalModel::xmlPrint().

void optimize

(

string

clusterFile

)

References StructuralComponent::addStructure(), PhysicalModel::getAtoms(), PhysicalModel::getExclusiveComponents(), PhysicalModel::getInformativeComponents(), StructuralComponent::getNumberOfStructures(), StructuralComponent::getStructure(), insert(), it, newAtoms, saveClusters(), PhysicalModel::setAtoms(), and update().

Referenced by main().

void saveClusters

(

string

clusterFile

)

References PhysicalModel::getNumberOfAtoms(), it, and precision.

Referenced by optimize().

void update

(

MultiComponent *

mc

)

References StructuralComponent::addStructureIfNotIn(), c, Cell::deleteAllStructures(), StructuralComponent::getAtoms(), MultiComponent::getCell(), Structure::getIndex(), MultiComponent::getNumberOfCells(), StructuralComponent::getNumberOfStructures(), Structure::getStructuralComponent(), StructuralComponent::getStructure(), Structure::getType(), StructureProperties::HEXAHEDRON, StructureProperties::LINE, StructureProperties::QUAD, StructuralComponent::removeStructure(), StructureProperties::TETRAHEDRON, StructureProperties::toString(), StructureProperties::TRIANGLE, and StructureProperties::WEDGE.

Referenced by camitk::RendererWidget::endPicking(), optimize(), camitk::RendererWidget::refresh(), camitk::RendererWidget::resetCamera(), camitk::RendererWidget::rotateCamera(), camitk::RendererWidget::setBackfaceCulling(), QtCanvasView::setCanvas(), camitk::RendererWidget::setControlMode(), camitk::RendererWidget::setPointSize(), and camitk::RendererWidget::startPicking().

Variable Documentation

vector<Cluster *> allClusters

unsigned int nrOfNewAtoms

Referenced by Cluster::Cluster(), and main().

PhysicalModel* pm

global variables

Referenced by main().

double precision

Referenced by insert(), main(), and saveClusters().

map<Atom *, Atom *> replacement